BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G01SP1|AL425578
(1027 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1559 1995 0.0
>3x_Contig1559
Length = 10415
Score = 1995 bits (1005), Expect = 0.0
Identities = 1024/1029 (99%), Gaps = 2/1029 (0%)
Strand = Plus / Minus
Query: 1 cctaacttgatgttcttcgagaaggcggtgtagaacttgtcgaattgttcagagtcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5537 cctaacttgatgttcttcgagaaggcggtgtagaacttgtcgaattgttcagagtcttcc 5478
Query: 61 gcgatttcgttgaaagtttcgatcatcttcttgacgatgttcttcttgataaccttcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5477 gcgatttcgttgaaagtttcgatcatcttcttgacgatgttcttcttgataaccttcatg 5418
Query: 121 atcttgttttgttgcaacatttctctggataagttcaatggcaaatcttcagagtcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5417 atcttgttttgttgcaacatttctctggataagttcaatggcaaatcttcagagtcaaca 5358
Query: 181 acacccttaacgaaggataaccattctgggatcaattcttcagcttcatcggtaatgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5357 acacccttaacgaaggataaccattctgggatcaattcttcagcttcatcggtaatgaag 5298
Query: 241 acacgacggacgtacaacttgatgttggtcttcttcttcttggattcgaacaggtcgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5297 acacgacggacgtacaacttgatgttggtcttcttcttcttggattcgaacaggtcgaat 5238
Query: 301 gcagctctctttggaacgaacaagatagccttgaattccaattgaccttcaacggagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5237 gcagctctctttggaacgaacaagatagccttgaattccaattgaccttcaacggagaaa 5178
Query: 361 tgtttcacggccaatgggtcttcccagtcgttggaaatagacttgtagaaggcattgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5177 tgtttcacggccaatgggtcttcccagtcgttggaaatagacttgtagaaggcattgtat 5118
Query: 421 tcttcttgggtgacctcggatgggttcttggtccacaaaggcttggtcttgttcaattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 tcttcttgggtgacctcggatgggttcttggtccacaaaggcttggtcttgttcaattct 5058
Query: 481 tccaattccttgacagtttccttgaccttcttagtcttttgttcatcatccttcttttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 tccaattccttgacagtttccttgaccttcttagtcttttgttcatcatccttcttttct 4998
Query: 541 tcgtcttcgtcaatttcttccaactttggtttcttgtcatcttcttcttcttctccttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 tcgtcttcgtcaatttcttccaactttggtttcttgtcatcttcttcttcttctccttcc 4938
Query: 601 ttcttctcttcctttacttcttcttcttcttcagcaaccggaacgtccttttcgacttcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4937 ttcttctcttcctttacttcttcttcttcttcagcaaccggaacgtccttttcgacttcc 4878
Query: 661 ttggtgacgagtaattgaattgggtaagcaacgaattcagagtgcttcttaacaacatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 ttggtgacgagtaattgaattgggtaagcaacgaattcagagtgcttcttaacaacatcc 4818
Query: 721 ttaattctcttttcttccaagtattccaattggtcttctttcaagaacaatctcaacaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 ttaattctcttttcttccaagtattccaattggtcttctttcaagaacaatctcaacaca 4758
Query: 781 gtacctctaccgattctctcgttggattcgtccaaggtaacggtgaaagaa-caccagcg 839
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4757 gtacctctaccgattctctcgttggattcgtccaaggtaacggtgaaagaaccaccagcg 4698
Query: 840 ttggattcccagatgtattgttcatcgtcgttgtgcttggagataacttgaactctgtca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4697 ttggattcccagatgtattgttcatcgtcgttgtgcttggagataacttgaactctgtca 4638
Query: 900 gcgaacaagaataaagagtagaaaccaacaccgaactgaccaatcatagaaacatctgca 959
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 gcgaccaagaataaagagtagaaaccaacaccgaactgaccaatcatagaaacatctgca 4578
Query: 960 ccggstgacaatgcttccataaaagccttggtacctgacttggcaatggta-ccaaattg 1018
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4577 ccggctgacaatgcttccataaaagccttggtacctgacttggcaatggtacccaaattg 4518
Query: 1019 ttwatcaat 1027
|| ||||||
Sbjct: 4517 ttaatcaat 4509
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,443
Number of Sequences: 1807
Number of extensions: 13443
Number of successful extensions: 558
Number of sequences better than 1.0e-20: 1
length of query: 1027
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1011
effective length of database: 10,329,639
effective search space: 10443265029
effective search space used: 10443265029
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)